The Xanthomonas Resource |
Purpose |
Algorithm |
URL |
Reference |
Wikipedia: Xanthomonas |
Wiki |
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Microbe Wiki: Xanthomonas |
Wiki |
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CPGR: Comprehensive Phytopathogen Genomics Resource |
Database |
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DIGAP: Database of Improved Gene Annotation in Phytopathogens |
Database |
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PAMDB: Plant Associated and Environmental Microbes Database |
Database |
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Pseudomonas syringae Genome Resources |
Database |
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The Xanthomonas sp. Portal |
Database |
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Réseau FNX: French Network on Xanthomonads |
Database |
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The Xanthomonas Genomics Resource |
Database |
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Xanthobase: Xanthomonas oryzae pv. oryzae genome database |
Database |
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The Xanthomonas Genome Browser |
Database |
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Comparative genome analysis |
EDGAR |
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Functional profiling of proteomes |
UFO |
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Prediction of secretion systems (T3SS, T4SS, T6SS) |
T346Hunter |
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Type III effector database |
T3SEdb |
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Type III effector database |
T3DB |
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TAL effector targets finder |
Talvez |
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Suite for the functional and phylogenetic comparison of TAL effectors |
QueTAL |
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Annotation and analysis of TAL effector genes |
AnnoTALE suite |
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List of TALEs |
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Complete DNA sequences of all TALEs |
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List of TALE classes |
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Type III effector prediction |
SIEVE |
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Type III effector prediction |
EffectiveT3 |
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Type III effector prediction |
modlab |
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Type III effector prediction |
Classifier |
Method and data available upon request |
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Type III effector prediction |
Classifier |
Discriminant functions available upon request |
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Type III effector prediction |
T3SEdb |
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Type III effector prediction |
HMM (EPIYA motif) |
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Type III effector prediction |
BPBAac |
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Type III effector prediction |
EffectPred |
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Type III effector prediction |
BEAN |
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Type III effector prediction |
T3_MM |
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Type III effector prediction |
cSIEVE |
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Type III effector prediction |
T3SPs |
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Type III effector prediction |
HMM-LDA |
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Type III effector prediction |
pEffect |
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Type III effector prediction |
GenSET |
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